← Back to the catalog
Privatenative split

huile_olive_extra_vierge_origine_geographique_ts

timeseries · NIR

huile_olive_extra_vierge_origine_geographique_ts. v2.0 standardized NIRS package: 1 spectral source(s), 1 declared target(s). Auto-generated from dataset_card.json (verify before publication).

nirv2timeseries
🔒
Private dataset. Full metadata and metrics are shown, but the bytes are not redistributed here — exporting the data requires a Dataverse token. The identity card carries no spectra, only descriptive statistics.
60
samples
570
wavelengths
1
sources
1
targets
14
metadata
NIR
family

Dataset property explorer

Mean profile risk0.37
Highest axisArtefacts locaux · 1.00
Diagnostics8
Sources profiled1
huile_olive_extra_vierge_origine_geographique_ts property profile0.250.50.751integritynoiseartefactsbaselinePCA outliersreferencerepeatabilitystructurehuile_olive_extra_vierge_origine_geographique_ts profileintegrity: 0.00noise: 0.01artefacts: 1.00baseline: 0.41PCA outliers: 0.51reference: 0.04repeatability: 0.00structure: 1.00huile_olive_ext…0 center · 1 outer ring · outward = stronger anomaly / heterogeneity signal

Profile axes

Intégrité0.00
Artefacts locaux1.00
Bruit0.01
Outliers PCA0.51
Distance à la référence0.04
Répétabilité0.00
Baseline / forme0.41
Structure multi-régimes1.00
Diagnostic hypotheses00.250.50.751hypothesis scoreSplice / raccord détecteursSplice / raccord détecteurs: 0.600.60Erreur interpolation / réécha…Erreur interpolation / rééchantillonnage: 0.570.57Signature VERA25-likeSignature VERA25-like: 0.470.47Spectre hors domaine valideSpectre hors domaine valide: 0.350.35Erreur calibration / référenc…Erreur calibration / référence blanche: 0.340.34Dataset multi-régimesDataset multi-régimes: 0.330.33Différence de sonde / géométr…Différence de sonde / géométrie: 0.330.33Fond différentFond différent: 0.270.27
DiagnosticScoreForceSignauxInterprétation probable
Splice / raccord détecteursX0.60moyenneSpike rate 1.00, Jump rate 1.00, SNR non dégradé 1.00Rupture aux jonctions de détecteurs, calibration locale ou sonde différente.
Erreur interpolation / rééchantillonnageX0.57moyenneSpike rate 1.00, Jump rate 1.00, SNR normal/élevé 1.00Artefacts numériques ou traitement spectral incorrect.
Signature VERA25-likeX0.47moyenneSpike rate 1.00, Jump rate 1.00, Mahalanobis / T2 0.51Combinaison possible changement de sonde + splice, amplifiée par géométrie, fond ou calibration.
Spectre hors domaine valideX0.35faibleStructure PCA 1.00, Mahalanobis / T2 0.51Variété, espèce, lot ou condition différente mais physiquement plausible.
Erreur calibration / référence blancheX0.34faibleartefacts locaux 1.00, Mahalanobis / T2 0.51, Baseline/mean/area 0.41Décalage systématique entre campagnes, instruments ou référence blanche.
Dataset multi-régimesX0.33faibleStructure PCA 1.00, Mahalanobis / T2 0.51, PCA Q 0.28Mélange de campagnes, opérateurs, lots, setups ou sous-populations spectrales.
Différence de sonde / géométrieX0.33faibleMahalanobis / T2 0.51, Baseline/mean/area 0.41, PCA Q 0.28Modification de l'illumination, collecte, angle ou distance sonde-échantillon.
Fond différentX0.27faibleMahalanobis / T2 0.51, Baseline/mean/area 0.41, PCA Q 0.28Effet systématique du support, blanc/noir, transflectance ou environnement de mesure.

Spectral sources

recovered_spectra

X · NIR · unknown
recovered_spectra spectra-20245001,0001,5002,000q05-q95 envelopeq25-q75 envelopemedian spectrummedianq25–q75q05–q95wavelength / none1,897none — median -0.6127 (q25–q75 -0.6171–-0.6105)1889.3none — median -0.5938 (q25–q75 -0.5987–-0.5913)1881.6none — median -0.5615 (q25–q75 -0.5661–-0.5583)1873.8none — median -0.5383 (q25–q75 -0.5424–-0.5353)1866.1none — median -0.5024 (q25–q75 -0.506–-0.4986)1858.4none — median -0.4604 (q25–q75 -0.464–-0.4551)1848.8none — median -0.3907 (q25–q75 -0.3942–-0.3857)1841none — median -0.364 (q25–q75 -0.3682–-0.3606)1833.3none — median -0.372 (q25–q75 -0.3753–-0.3691)1825.6none — median -0.3642 (q25–q75 -0.3673–-0.3619)1817.9none — median -0.3832 (q25–q75 -0.3856–-0.3811)1810.2none — median -0.3976 (q25–q75 -0.3999–-0.3956)1802.4none — median -0.4023 (q25–q75 -0.4048–-0.4004)1794.7none — median -0.4142 (q25–q75 -0.4179–-0.412)1787none — median -0.4155 (q25–q75 -0.4208–-0.4119)1779.3none — median -0.4279 (q25–q75 -0.4343–-0.4229)1771.6none — median -0.4458 (q25–q75 -0.4512–-0.4444)1761.9none — median -0.4172 (q25–q75 -0.4192–-0.4151)1754.2none — median -0.3507 (q25–q75 -0.3531–-0.3492)1746.5none — median -0.2824 (q25–q75 -0.2856–-0.2798)1738.8none — median -0.2117 (q25–q75 -0.2154–-0.2095)1731none — median -0.1708 (q25–q75 -0.1738–-0.1671)1723.3none — median -0.1831 (q25–q75 -0.1855–-0.1797)1715.6none — median -0.1854 (q25–q75 -0.1868–-0.1824)1707.9none — median -0.1676 (q25–q75 -0.1697–-0.1656)1700.2none — median -0.1488 (q25–q75 -0.1504–-0.147)1692.5none — median -0.1069 (q25–q75 -0.1081–-0.1046)1682.8none — median -0.04162 (q25–q75 -0.04385–-0.03969)1675.1none — median 0.0345 (q25–q75 0.03172–0.03643)1667.4none — median 0.085 (q25–q75 0.08174–0.08731)1659.6none — median 0.076 (q25–q75 0.07331–0.07802)1651.9none — median 0.01954 (q25–q75 0.01601–0.02279)1644.2none — median 0.09704 (q25–q75 0.09344–0.1006)1636.5none — median 0.2414 (q25–q75 0.2397–0.2445)1628.8none — median 0.3332 (q25–q75 0.331–0.3361)1621.1none — median 0.4996 (q25–q75 0.4938–0.5064)1613.3none — median 0.909 (q25–q75 0.8951–0.919)1605.6none — median 1.28 (q25–q75 1.273–1.287)1596none — median 1.419 (q25–q75 1.415–1.422)1588.2none — median 1.214 (q25–q75 1.209–1.221)1580.5none — median 1.478 (q25–q75 1.472–1.484)1572.8none — median 1.451 (q25–q75 1.444–1.458)1565.1none — median 1.32 (q25–q75 1.309–1.329)1557.4none — median 2.228 (q25–q75 2.215–2.238)1549.7none — median 2.769 (q25–q75 2.762–2.776)1541.9none — median 3.058 (q25–q75 3.053–3.065)1534.2none — median 3.234 (q25–q75 3.23–3.239)1526.5none — median 2.916 (q25–q75 2.912–2.918)1518.8none — median 2.364 (q25–q75 2.358–2.367)1509.1none — median 1.736 (q25–q75 1.732–1.74)1501.4none — median 1.34 (q25–q75 1.336–1.343)1493.7none — median 1.028 (q25–q75 1.022–1.031)1486none — median 0.8955 (q25–q75 0.8907–0.8993)1478.3none — median 0.8589 (q25–q75 0.8534–0.8612)1470.5none — median 0.9391 (q25–q75 0.9367–0.9414)1462.8none — median 1.042 (q25–q75 1.041–1.044)1455.1none — median 1.048 (q25–q75 1.046–1.05)1447.4none — median 0.8121 (q25–q75 0.8091–0.8152)1439.7none — median 0.6032 (q25–q75 0.5966–0.6075)1430none — median 0.482 (q25–q75 0.4767–0.4854)1422.3none — median 0.3918 (q25–q75 0.3858–0.3957)1414.6none — median 0.3454 (q25–q75 0.3432–0.3475)1406.9none — median 0.1552 (q25–q75 0.1531–0.1589)1399.1none — median 0.109 (q25–q75 0.1078–0.1119)1391.4none — median 0.08277 (q25–q75 0.08172–0.08559)1383.7none — median 0.04166 (q25–q75 0.04088–0.04371)1376none — median 0.01887 (q25–q75 0.01829–0.02)1368.3none — median -0.07855 (q25–q75 -0.07954–-0.07735)1360.5none — median -0.0995 (q25–q75 -0.1004–-0.09823)1352.8none — median 0.002255 (q25–q75 0.0008344–0.003411)1343.2none — median 0.08011 (q25–q75 0.07659–0.08121)1335.5none — median 0.09463 (q25–q75 0.09175–0.09586)1327.7none — median 0.1194 (q25–q75 0.1169–0.1208)1320none — median 0.2153 (q25–q75 0.2107–0.2164)1312.3none — median -0.01119 (q25–q75 -0.0145–-0.009831)1304.6none — median -0.3268 (q25–q75 -0.3284–-0.3236)1296.9none — median -0.3623 (q25–q75 -0.3652–-0.3595)1289.1none — median -0.3728 (q25–q75 -0.375–-0.3708)1281.4none — median -0.2471 (q25–q75 -0.2489–-0.2456)1273.7none — median -0.1971 (q25–q75 -0.1991–-0.1955)1266none — median -0.1358 (q25–q75 -0.1385–-0.1299)1256.3none — median 0.2455 (q25–q75 0.2413–0.2534)1248.6none — median 0.432 (q25–q75 0.4271–0.4383)1240.9none — median 0.8545 (q25–q75 0.847–0.8585)1233.2none — median 1.057 (q25–q75 1.051–1.06)1225.5none — median 0.4823 (q25–q75 0.4794–0.4873)1217.7none — median -0.5842 (q25–q75 -0.5877–-0.5818)1210none — median -0.759 (q25–q75 -0.7611–-0.7552)1202.3none — median -0.827 (q25–q75 -0.8292–-0.8239)1194.6none — median -0.8574 (q25–q75 -0.8597–-0.8539)1186.9none — median -0.8624 (q25–q75 -0.8644–-0.859)1177.2none — median -0.8883 (q25–q75 -0.8908–-0.8866)1169.5none — median -0.9026 (q25–q75 -0.9044–-0.8999)1161.8none — median -0.9053 (q25–q75 -0.9079–-0.904)1154.1none — median -0.9007 (q25–q75 -0.9032–-0.8982)1146.3none — median -0.9141 (q25–q75 -0.9155–-0.9127)1138.6none — median -0.9197 (q25–q75 -0.9212–-0.9182)1130.9none — median -0.914 (q25–q75 -0.9157–-0.9129)1123.2none — median -0.915 (q25–q75 -0.9173–-0.9142)1115.5none — median -0.9176 (q25–q75 -0.9197–-0.9161)1107.8none — median -0.9182 (q25–q75 -0.9203–-0.9163)1100none — median -0.9148 (q25–q75 -0.9177–-0.9132)1090.4none — median -0.9116 (q25–q75 -0.9158–-0.9079)1082.7none — median -0.9083 (q25–q75 -0.9131–-0.9013)1074.9none — median -0.9012 (q25–q75 -0.9054–-0.8919)1067.2none — median -0.8921 (q25–q75 -0.8964–-0.8826)1059.5none — median -0.8842 (q25–q75 -0.8881–-0.8762)1051.8none — median -0.8617 (q25–q75 -0.8645–-0.8539)1044.1none — median -0.81 (q25–q75 -0.8122–-0.8058)1036.4none — median -0.8071 (q25–q75 -0.8092–-0.8043)1028.6none — median -0.845 (q25–q75 -0.8467–-0.8429)1020.9none — median -0.8393 (q25–q75 -0.8414–-0.8369)1013.2none — median -0.8117 (q25–q75 -0.8141–-0.8086)1003.5none — median -0.75 (q25–q75 -0.7539–-0.7471)995.83none — median -0.6627 (q25–q75 -0.6673–-0.6588)988.11none — median -0.5581 (q25–q75 -0.5669–-0.5434)980.39none — median -0.4343 (q25–q75 -0.4556–-0.4139)972.67none — median -0.08394 (q25–q75 -0.1271–-0.06623)964.95none — median 0.8468 (q25–q75 0.7904–0.8632)957.24none — median 2.827 (q25–q75 2.813–2.841)949.52none — median 3.632 (q25–q75 3.624–3.644)941.8none — median 2.186 (q25–q75 2.174–2.199)934.08none — median 0.3836 (q25–q75 0.3762–0.3901)924.43none — median -0.499 (q25–q75 -0.5014–-0.4955)916.71none — median -0.7029 (q25–q75 -0.7059–-0.7001)908.99none — median -0.791 (q25–q75 -0.7938–-0.788)901.27none — median -0.8385 (q25–q75 -0.8416–-0.8359)893.56none — median -0.8704 (q25–q75 -0.8734–-0.8676)885.84none — median -0.8966 (q25–q75 -0.8994–-0.8933)878.12none — median -0.9154 (q25–q75 -0.9182–-0.9124)870.4none — median -0.9282 (q25–q75 -0.9307–-0.9247)862.68none — median -0.9403 (q25–q75 -0.9429–-0.9366)854.96none — median -0.952 (q25–q75 -0.9549–-0.9486)847.24none — median -0.9591 (q25–q75 -0.9615–-0.9556)837.59none — median -0.9659 (q25–q75 -0.9683–-0.9622)829.88none — median -0.9716 (q25–q75 -0.9743–-0.9683)822.16none — median -0.9742 (q25–q75 -0.9768–-0.9709)814.44none — median -0.9762 (q25–q75 -0.9788–-0.9731)806.72none — median -0.9787 (q25–q75 -0.9814–-0.9752)799none — median -0.98 (q25–q75 -0.9826–-0.9763)

Sampling

Wavelengths570
Axis range799–1,897 none
Mean spacing1.93 none
Griduniform
Observations60

Signal & quality

Value range-1 – 3.73
Mean range-0.98 – 3.7
Mean level2.357e-10
Area1.537
PTP4.677
Noise RMS0.0017175
SNR4.4e+02
SNR dB5e+01 dB
Dynamic range4.68
Smoothness0.03979
Saturated0.0%
X-outliers19

Integrity & artefacts

NaN ratio0.00%
Inf count0
Zero ratio0.00%
Spike count3,191
Spike rate9.36%
Jump count2,100
Jump rate6.15%
Clip fraction0.01%

Shape & reference

Baseline slope0.95384
Curvature RMS0.039656
D1 RMS0.092277
RMS to mean0.0074952
RMS p950.013041
SAM to mean0.0075019
SAM p950.013052
Affine offset p951.8806e-09
Affine gain p95 Δ5.7292e-05
Affine residual p950.01304
Xcorr lag p950

Outliers & repeatability

PCA Q p95/median2.3
Hotelling T2 p95/median4.1
Mahalanobis H p95/median2
Repeat groups0

Dimensionality (PCA)

Effective rank3.1
PCs → 95% var6
PCs → 99% var17
Top-10 cum. var97.8%
Computed metric scores 29worst 1.00
FamilleMétrique calculéeValeurScoreNiveauInterprétation datasetCauses typiquesCalcul / scoring
Intégrité des donnéesNaN ratiointegrity.nan_ratio0%0.00faibleSpectre completErreur acquisition/exportcount(isnan(X)) / X.sizealert = min(1, nan_ratio / 0.05)
Intégrité des donnéesInf countintegrity.inf_count00.00faibleNormalCalculs invalidescount(isinf(X))alert = min(1, inf_count / 1)
Intégrité des donnéesZero ratiointegrity.zero_ratio0%0.00faibleNormalExport, saturationcount(X == 0) / count(finite X)alert = min(1, zero_ratio / 0.05)
Amplitude globaleMean reflectanceamplitude.mean_reflectance2.3573e-100.41faibleTrop sombreFond, géométriemean(X finite)alert reuses baseline/shape drift because absolute reflectance ranges are technology-dependent
Amplitude globaleArea under curveamplitude.area_under_curve1.53670.41faibleNormalDistance sondetrapezoid(mean_spectrum, spectral_axis)alert reuses baseline/shape drift because area scale depends on axis and units
Amplitude globalePeak-to-peak (PTP)amplitude.peak_to_peak4.67670.00faibleVariabilité forteSaturationmax(mean_spectrum) - min(mean_spectrum)alert increases when dynamic range is abnormally flat
Amplitude globaleVarianceamplitude.variance0.998250.00faibleNormal ou hétérogèneMauvais contactvar(X finite)alert increases when variance/dynamic range is abnormally flat
BruitNoise RMSnoise.noise_rms0.00171750.01faibleStableLampe, détecteurmedian MAD(second derivative) * 1.4826 / sqrt(6)alert = noise_rms / signal_scale, saturated at 5%
BruitSNRnoise.snr435.710.00faibleBon signalAcquisitionmean(abs(X)) / noise_rmsalert decreases with SNR dB; >=40 dB is treated as low alert
BruitBandwise SNRnoise.bandwise_snr_min9.94630.43moyenZone problématiqueDétecteurmin(abs(mean_spectrum) / local second-derivative noise)alert decreases with worst-band SNR dB; >=35 dB is treated as low alert
Artefacts locauxSpike countartefacts.spike_count3,1911.00fortArtefactsCosmic rays, splicecount robust outliers in second derivativealert follows spike_rate, saturated at 1%
Artefacts locauxSpike rateartefacts.spike_rate9.36%1.00fortSpectre suspectInterpolationspike_count / (n_samples * (n_features - 2))alert = min(1, spike_rate / 0.01)
Artefacts locauxJump countartefacts.jump_count2,1001.00fortRaccord détecteurSplicecount robust outliers in first derivativealert follows jump_rate, saturated at 1%
Artefacts locauxJump rateartefacts.jump_rate6.15%1.00fortProblème spectralCalibrationjump_count / (n_samples * (n_features - 1))alert = min(1, jump_rate / 0.01)
Artefacts locauxClip fractionartefacts.clip_fraction0.00585%0.01faibleNormalDétecteur saturéfraction of finite cells equal to repeated min/max extremaalert = min(1, clip_fraction / 0.01)
Forme spectraleBaseline slopeshape.baseline_slope0.953840.41faibleStableÉclairementlinear slope of mean_spectrum over normalized axisalert = abs(slope / signal_scale), saturated at 0.5
Forme spectraleCurvature RMSshape.curvature_rms0.0396560.85fortForme inhabituelleFond, splicemedian RMS(second derivative per spectrum)alert = curvature_rms / signal_scale, saturated at 1%
Forme spectraleD1 RMSshape.d1_rms0.0922770.39faiblePlatBiologie ou artefactmedian RMS(first derivative per spectrum)alert = d1_rms / signal_scale, saturated at 5%
Outliers multivariésPCA Q (SPE)outliers.pca_q_ratio2.26410.28faibleConformeArtefact, mélangep95(Q/SPE residual) / median(Q/SPE residual)alert = min(1, pca_q_ratio / 8)
Outliers multivariésHotelling T²outliers.hotelling_t2_ratio4.09310.51moyenExtrême mais cohérentVariabilité naturellep95(Hotelling T2) / median(Hotelling T2)alert = min(1, hotelling_t2_ratio / 8)
Outliers multivariésMahalanobis Houtliers.mahalanobis_h_ratio2.02220.51moyenOutlier globalDomaine différentp95(sqrt(T2)) / median(sqrt(T2))alert = min(1, mahalanobis_h_ratio / 4)
Comparaison à référenceRMS to mean spectrumreference.rms_to_mean_spectrum_p950.0130410.01faibleTypiqueDomain shiftp95 RMS distance to dataset mean spectrumalert = RMS_p95 / signal_scale, saturated at 25%
Comparaison à référenceSpectral Angle Mapper (SAM)reference.sam_to_mean_spectrum_p950.0130520.04faibleSimilaireFond, géométriep95 spectral angle to dataset mean spectrumalert = min(1, SAM_p95 / 0.35 rad)
RépétabilitéRMS intra-IDrepeatability.rms_intra_id0.00faibleStablePositionnementmedian RMS distance to repeated-sample centroidalert = RMS_intra_ID / signal_scale, saturated at 10%
RépétabilitéSAM intra-IDrepeatability.sam_intra_id0.00faibleStableAcquisitionmedian SAM to repeated-sample centroidalert = min(1, SAM_intra_ID / 0.15 rad)
RépétabilitéCV intra-IDrepeatability.cv_intra_id0.00faibleStableOpérateurmedian within-ID band CValert = min(1, CV_intra_ID / 0.25)
Structure du datasetPCA score densitystructure.pca_score_density12.1931.00fortSous-populationsLots différents1 / median kNN distance in PCA score spacealert follows density_cv/profile structure complexity, not raw density alone
Structure du datasetLocal Outlier Factor (LOF)structure.local_outlier_factor_p953.04321.00fortSpectre isoléCas raresp95 approximate LOF from PCA-score kNN distancesalert = min(1, max(0, LOF_p95 - 1) / 2)
Structure du datasetIsolation Forest scorestructure.isolation_forest_score_p950.602861.00fortSpectre atypiqueDiverses causesp95 IsolationForest anomaly score on PCA scoresalert follows structure complexity; raw score is implementation-dependent
X PCA score plot-0.75-0.50-0.250.000.25-0.2-0.10.00.10.2PC1 -0.2717 · PC2 -0.06451PC1 -0.1056 · PC2 0.02656PC1 -0.0993 · PC2 -0.01607PC1 -0.1159 · PC2 -0.0129PC1 -0.2326 · PC2 0.06449PC1 -0.02947 · PC2 0.08024PC1 -0.04115 · PC2 0.0902PC1 -0.03665 · PC2 0.09064PC1 0.01637 · PC2 0.09032PC1 -0.04457 · PC2 0.1024PC1 -0.04485 · PC2 0.08428PC1 -0.1177 · PC2 0.133PC1 -0.01019 · PC2 0.1133PC1 0.0437 · PC2 -0.03941PC1 0.009353 · PC2 0.01203PC1 -0.5773 · PC2 -0.1198PC1 -0.7294 · PC2 -0.1591PC1 0.02296 · PC2 -0.05822PC1 0.1954 · PC2 -0.03631PC1 0.2101 · PC2 -0.06997PC1 0.181 · PC2 -0.07295PC1 0.1988 · PC2 -0.03115PC1 0.1492 · PC2 -0.05177PC1 0.1691 · PC2 -0.07813PC1 0.1288 · PC2 -0.06609PC1 0.1737 · PC2 -0.07692PC1 0.2142 · PC2 -0.06991PC1 0.1102 · PC2 -0.04758PC1 0.2041 · PC2 -0.05066PC1 0.0322 · PC2 0.1108PC1 -0.03723 · PC2 -0.03341PC1 -0.2239 · PC2 -0.0247PC1 -0.09407 · PC2 0.03045PC1 -0.0411 · PC2 -0.01267PC1 -0.06182 · PC2 -0.009914PC1 -0.02002 · PC2 0.09492PC1 -0.01627 · PC2 0.08487PC1 -0.0372 · PC2 0.1199PC1 0.02399 · PC2 0.04407PC1 -0.00265 · PC2 0.152PC1 0.005596 · PC2 0.02808PC1 -0.1609 · PC2 0.1549PC1 -0.06004 · PC2 0.1051PC1 -0.03335 · PC2 0.1112PC1 0.09416 · PC2 -0.003601PC1 -0.7081 · PC2 -0.1889PC1 -0.1324 · PC2 0.03961PC1 -0.05656 · PC2 -0.03053PC1 0.174 · PC2 -0.06994PC1 0.1981 · PC2 -0.07935PC1 0.1532 · PC2 -0.06522PC1 0.2033 · PC2 -0.05569PC1 0.2227 · PC2 -0.04286PC1 0.1814 · PC2 -0.08098PC1 0.2234 · PC2 -0.06538PC1 0.1745 · PC2 -0.03702PC1 0.1937 · PC2 -0.07495PC1 0.1679 · PC2 -0.07048PC1 0.1291 · PC2 -0.03523PC1 -0.06231 · PC2 0.139PC1 (71.3%)PC2 (11.7%)60 scores
PCA explained variance0%25%50%75%100%PC1: 71.3% (cumulative 71.3%)1PC2: 11.7% (cumulative 83.0%)2PC3: 5.9% (cumulative 88.9%)3PC4: 3.5% (cumulative 92.3%)4PC5: 1.8% (cumulative 94.1%)5PC6: 1.6% (cumulative 95.7%)6PC7: 0.9% (cumulative 96.6%)7PC8: 0.5% (cumulative 97.1%)8PC9: 0.4% (cumulative 97.5%)9PC10: 0.3% (cumulative 97.8%)10cumulative explained variancePC variancecumulativeprincipal component · cumulative (dashed)

Metric interpretation reference

Metric catalog 29
FamilleMétriqueCe qu’elle détecteForte valeur =Faible valeur =Causes typiquesCalcul / score
Intégrité des donnéesNaN ratioDonnées manquantesSpectre corrompuSpectre completErreur acquisition/exportcount(isnan(X)) / X.sizealert = min(1, nan_ratio / 0.05)
Intégrité des donnéesInf countValeurs infiniesCorruptionNormalCalculs invalidescount(isinf(X))alert = min(1, inf_count / 1)
Intégrité des donnéesZero ratioColonnes ou cellules nullesSpectre tronquéNormalExport, saturationcount(X == 0) / count(finite X)alert = min(1, zero_ratio / 0.05)
Amplitude globaleMean reflectanceNiveau moyenTrop clair / fond visibleTrop sombreFond, géométriemean(X finite)alert reuses baseline/shape drift because absolute reflectance ranges are technology-dependent
Amplitude globaleArea under curveIntensité globaleDifférence d'éclairementNormalDistance sondetrapezoid(mean_spectrum, spectral_axis)alert reuses baseline/shape drift because area scale depends on axis and units
Amplitude globalePeak-to-peak (PTP)DynamiqueVariabilité forteSpectre platSaturationmax(mean_spectrum) - min(mean_spectrum)alert increases when dynamic range is abnormally flat
Amplitude globaleVarianceVariabilité spectraleNormal ou hétérogèneSpectre platMauvais contactvar(X finite)alert increases when variance/dynamic range is abnormally flat
BruitNoise RMSBruit haute fréquenceBruitéStableLampe, détecteurmedian MAD(second derivative) * 1.4826 / sqrt(6)alert = noise_rms / signal_scale, saturated at 5%
BruitSNRQualité signalBon signalMauvais signalAcquisitionmean(abs(X)) / noise_rmsalert decreases with SNR dB; >=40 dB is treated as low alert
BruitBandwise SNRBruit localiséZone fiableZone problématiqueDétecteurmin(abs(mean_spectrum) / local second-derivative noise)alert decreases with worst-band SNR dB; >=35 dB is treated as low alert
Artefacts locauxSpike countPics étroitsArtefactsSpectre propreCosmic rays, splicecount robust outliers in second derivativealert follows spike_rate, saturated at 1%
Artefacts locauxSpike rateDensité de picsSpectre suspectNormalInterpolationspike_count / (n_samples * (n_features - 2))alert = min(1, spike_rate / 0.01)
Artefacts locauxJump countDiscontinuitésRaccord détecteurContinuSplicecount robust outliers in first derivativealert follows jump_rate, saturated at 1%
Artefacts locauxJump rateFréquence de sautsProblème spectralNormalCalibrationjump_count / (n_samples * (n_features - 1))alert = min(1, jump_rate / 0.01)
Artefacts locauxClip fractionSaturationClippingNormalDétecteur saturéfraction of finite cells equal to repeated min/max extremaalert = min(1, clip_fraction / 0.01)
Forme spectraleBaseline slopePente globaleDériveStableÉclairementlinear slope of mean_spectrum over normalized axisalert = abs(slope / signal_scale), saturated at 0.5
Forme spectraleCurvature RMSCourbureForme inhabituelleLisseFond, splicemedian RMS(second derivative per spectrum)alert = curvature_rms / signal_scale, saturated at 1%
Forme spectraleD1 RMSVariabilité localeSpectre structuréPlatBiologie ou artefactmedian RMS(first derivative per spectrum)alert = d1_rms / signal_scale, saturated at 5%
Outliers multivariésPCA Q (SPE)Non expliqué par PCASpectre atypiqueConformeArtefact, mélangep95(Q/SPE residual) / median(Q/SPE residual)alert = min(1, pca_q_ratio / 8)
Outliers multivariésHotelling T²Extrême dans PCAExtrême mais cohérentCentralVariabilité naturellep95(Hotelling T2) / median(Hotelling T2)alert = min(1, hotelling_t2_ratio / 8)
Outliers multivariésMahalanobis HDistance au nuageOutlier globalPopulation normaleDomaine différentp95(sqrt(T2)) / median(sqrt(T2))alert = min(1, mahalanobis_h_ratio / 4)
Comparaison à référenceRMS to mean spectrumDistance moyenneSpectre différentTypiqueDomain shiftp95 RMS distance to dataset mean spectrumalert = RMS_p95 / signal_scale, saturated at 25%
Comparaison à référenceSpectral Angle Mapper (SAM)Différence de formeForme différenteSimilaireFond, géométriep95 spectral angle to dataset mean spectrumalert = min(1, SAM_p95 / 0.35 rad)
RépétabilitéRMS intra-IDReproductibilitéMauvaise répétabilitéStablePositionnementmedian RMS distance to repeated-sample centroidalert = RMS_intra_ID / signal_scale, saturated at 10%
RépétabilitéSAM intra-IDVariation de formeInstableStableAcquisitionmedian SAM to repeated-sample centroidalert = min(1, SAM_intra_ID / 0.15 rad)
RépétabilitéCV intra-IDVariabilité interneMauvais contrôleStableOpérateurmedian within-ID band CValert = min(1, CV_intra_ID / 0.25)
Structure du datasetPCA score densityClustersSous-populationsHomogèneLots différents1 / median kNN distance in PCA score spacealert follows density_cv/profile structure complexity, not raw density alone
Structure du datasetLocal Outlier Factor (LOF)Anomalie localeSpectre isoléPopulation normaleCas raresp95 approximate LOF from PCA-score kNN distancesalert = min(1, max(0, LOF_p95 - 1) / 2)
Structure du datasetIsolation Forest scoreAnomalie globaleSpectre atypiqueNormalDiverses causesp95 IsolationForest anomaly score on PCA scoresalert follows structure complexity; raw score is implementation-dependent
Technology-specific extensions
TechnologieAdaptations / métriquesAnomalies cibléesCommentaire pratique
UV-Vis 300-1000 nmBaseline, pente globale, dérive aux bords 300-350 et 900-1000; métriques par zonesLumière parasite, mauvais blanc, saturation, faible signal aux extrémitésLes bords sont souvent instables; calculer aussi des scores edge/middle.
UV-Vis 300-1000 nmSaturation / clipping proche absorbance max ou réflectance maxSignal écrêtéTrès important si absorption forte.
UV-Vis 300-1000 nmRed-edge, position de maximum, ratios de bandes si végétalDécalage biologique ou artefact optiqueAide à distinguer changement réel et problème d'acquisition.
UV-Vis 300-1000 nmSmoothness / roughness indexBruit haute fréquenceSouvent plus informatif que le SNR seul.
MIR / ATR-FTIRATR contact quality index: intensité globale, aire totale, profondeur des bandes clésMauvais contact cristal-échantillonCrucial: beaucoup d'anomalies viennent du contact ATR.
MIR / ATR-FTIRCO2 / H2O atmospheric bandsMauvaise correction atmosphériquePics parasites fréquents.
MIR / ATR-FTIRBaseline curvature / rubber-band residualDiffusion, contact, dérive baselineTrès utile avant PCA.
MIR / ATR-FTIRPeak position shiftMauvais alignement spectral / calibrationImportant en FTIR car de petits shifts comptent.
MIR / ATR-FTIRBand area ratios sur bandes connuesSpectre chimiquement incohérentÀ adapter par matrice: polysaccharides, protéines, lipides, etc.
HS-MSTotal Ion Current (TIC), Base Peak Intensity (BPI)Injection faible, ionisation instableÉquivalent MS du niveau global spectral.
HS-MSNombre de pics détectésSpectre pauvre ou trop bruitéTrop peu = mauvais signal; trop = bruit/contamination.
HS-MSMass accuracy / m/z driftProblème calibration masseFondamental en HRMS.
HS-MSRetention time drift si LC/GC-MSDérive chromatographiqueÀ suivre sur standards/QC pools.
HS-MSBlank contamination scoreContaminants / carry-overComparer échantillons vs blancs.
HS-MSInternal standard CVVariabilité instrumentaleTrès robuste si standards disponibles.
HS-MSMissingness par featureInstabilité de détectionCrucial pour filtrer les variables.
Avec répétitionsRMS intra-échantillonRépétabilité globaleApplicable à toutes les technologies.
Avec répétitionsSAM / corrélation intra-échantillonRépétabilité de formeTrès utile pour spectres.
Avec répétitionsCV intra-échantillon par bande / featureRépétabilité localeDétecte les zones instables.
Avec répétitionsICC ou variance componentsPart variance échantillon vs techniqueTrès utile si plusieurs répétitions par sample.
Avec répétitionsDistance au centroïde intra-IDRépétition aberrantePermet de flagger la mauvaise répétition plutôt que le sample entier.
Bug-hunting / supervised audits
Famille de bug potentielMéthodes à ajouterCe que ça détecteÉtat dans l’explorateur
Shift spectral globalCorrélation spectre moyen inter-dataset, DTW, cross-correlation, comparaison positions de picsDécalage en longueur d'onde, mauvais alignement, interpolation différentePartiellement calculé: cross-correlation lag et dispersion des positions de pics vs spectre moyen.
Baseline / offset / gainRégression chaque spectre vs spectre moyen: x = a + b ref + residual; suivi de a, b, RMS résiduelOffset additif, effet multiplicatif, dérive de baselineCalculé dans reference.affine_*.
Mélange de lignes / mauvais appariement X-M-YVérification index, hash des lignes, duplication ID, distance spectrale intra-ID, labels incohérentsLignes mélangées, metadata mal alignées, Y attribué au mauvais spectrePartiellement couvert par répétabilité intra-ID; checks index/hash à ajouter au pipeline canonical.
Fuite d'information / répétitions mal splitéesGroupKFold par sample_id vs StratifiedKFold random; audit des partitions par sample_idPerformance artificiellement bonne due aux répétitionsNécessite splits et benchmark modèle; non calculé par la carte descriptive.
Label bugsÉchantillons proches en X mais Y différents, confident learning, erreurs systématiques FP/FNY inversés, erreurs de saisie, classes ambiguësNécessite Y et/ou modèle; recommandé pour l'explorateur supervisé.
Sous-domaines cachésPCA/UMAP/t-SNE + clustering non supervisé + association avec dataset/Y/date/operatorLots, campagnes, sondes, backgrounds non renseignésPartiellement calculé par structure PCA/LOF; UMAP/t-SNE hors carte statique.
Artefacts localisés inconnusCarte wavelength x dataset: différence moyenne, différence variance, KS par longueur d'ondeRégions spectrales anormales non anticipéesÀ calculer au niveau banque quand plusieurs datasets partagent un axe spectral.
Ruptures instrumentalesDiscontinuités dans dérivées, changepoint detectionSplice, raccord détecteur, saut local non prévuCalculé par jump/spike rates; changepoint plus avancé à ajouter.
Mélange / contamination spectraleNMF / unmixing / reconstruction par convex hullComposante externe: fond, plastique, solNon calculé automatiquement; nécessite hypothèses de composants ou grande bibliothèque.
Features instables mais prédictivesImportance modèle vs instabilité QC par variableModèle qui apprend un artefact plutôt qu'un signal biologiqueNécessite modèle supervisé; recommandé pour rapports de benchmark.

Variables

Targets 1

origine_geographique

target · categorical
origine_geographique classes33: 252511: 171700: 101022: 88
n / missing60 / 0
Classes4
Balance (entropy)0.93
Imbalance ratio3
Top class3 (25)

Metadata 5

ID_sample

metadata · categorical
n / missing60 / 0
Classes60
Balance (entropy)1
Imbalance ratio1
Top classOliveOil_train_0001 (1)

split

metadata · categorical
split classestraintrain: 3030testtest: 3030
n / missing60 / 0
Classes2
Balance (entropy)1
Imbalance ratio1
Top classtrain (30)

raw_label

metadata · categorical
raw_label classes44: 252522: 171711: 101033: 88
n / missing60 / 0
Classes4
Balance (entropy)0.93
Imbalance ratio3
Top class4 (25)

reference_value

metadata · numeric
reference_value distribution01020301 – 1.125: 101.125 – 1.25: 01.25 – 1.375: 01.375 – 1.5: 01.5 – 1.625: 01.625 – 1.75: 01.75 – 1.875: 01.875 – 2: 02 – 2.125: 172.125 – 2.25: 02.25 – 2.375: 02.375 – 2.5: 02.5 – 2.625: 02.625 – 2.75: 02.75 – 2.875: 02.875 – 3: 03 – 3.125: 83.125 – 3.25: 03.25 – 3.375: 03.375 – 3.5: 03.5 – 3.625: 03.625 – 3.75: 03.75 – 3.875: 03.875 – 4: 2512510
n / missing60 / 0
Mean ± SD2.8 ± 1.16
Median3
Range1 – 4
CV0.415
Skew / kurtosis-0.27 / -1.5
Normal?no

class_index

metadata · categorical
class_index classes33: 252511: 171700: 101022: 88
n / missing60 / 0
Classes4
Balance (entropy)0.93
Imbalance ratio3
Top class3 (25)
Constant metadata 9
  • SpectralRep1
  • datasetOliveOil
  • producthuile_olive_extra_vierge
  • trait_headerorigine_geographique
  • trait_descriptionOrigine geographique de l'huile d'olive (codes bruts du dataset).
  • spectroFTIR
  • dimensions1
  • feature_count_per_dimension570
  • wavelength_notePublication source: tous les spectres d'absorbance ont ete tronques sur 799-1897 cm^-1, axe lineaire reconstruit ici en ordre decroissant 1897->799 sur 570 variables.

Alignment

Alignment levelobservation
Sample id availableno
Samples60
Observations (total)60
Reps per samplemin 1 · mean 1 · max 1

Splits

originaltest: 30, train: 30 documented · not applied

Provenance & citation

Contributortimeseries_classif_nirs_database
Origin · url [open]https://www.timeseriesclassification.com/aeon-toolkit/OliveOil.zip
Origin · url [open]https://www.timeseriesclassification.com/description.php?Dataset=OliveOil
Origin · script [manual]source_to_standard.py — standardization script (maintainer-only)

Governance & integrity

Tierprivate
LicenseLicenseRef-not-cleared
Permitted useResearch and benchmarking; private use only.
Access policyManual download / private-use-only per source.
RedistributionRecovered from local initial-source exports; rights not cleared for redistribution.
Content version1.0.0
Schema / protocol2.0
Content hashe627483789fc0bd1…
Processing hash0e35c420e99a51a9…
Metadata hash778e711ac61f1614…

Load this dataset

# pip install nirs4all-datasets
from nirs4all_datasets import get

# private dataset — export requires a Dataverse token
ds = get("timeseries_huile_olive_extra_vierge_origine_geographique_ts", token="…")
X, y = ds.x(), ds.y()
print(X.shape, y.shape)

Metadata downloads are available for public datasets only. The dataset bytes are never served here — fetch them from the origin / DOI above.